importgvcftodb

Add samples to a genomic database.

Quick Start

$ pbrun importgvcftodb --db-dir database_dir --in-gvcf input.g.vcf

Options

Options

Description

--db-dir (required)

Path to the directory which has the genomic database already initialized.

--in-gvcf (required)

Path to input g.vcf.gz file to be added to the database. This option can be repeated multiple times.

--num-threads

Defaults to 4.

Number of threads for worker.